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Table 2 Summary table representing the SNPs numbers representing the SNPs count and the transition/transversion (ts/tv) ratio

From: Pangenomics of the cichlid species (Oreochromis niloticus) reveals genetic admixture ancestry with potential for aquaculture improvement in Kenya

Callset

SNPs

Indels

MNPs

Others

n

ts/tv

(1st ALT)

n

frm*

  

snps

2,787,593

1.62

1.62

0

–

0

0

Callset

Singletons (AC = 1)

Multiallelic

SNPs

ts/tv

Indels

Sites

SNPS

snps

100.0%

1.62

0.0%

0

0

  1. *Frameshift ratio: out/(out + in)